Neuron Simulator Virtual Lab in School of Biotechnology | Amrita … The lab is an education platform for engineers and biologists without major requirements for learning methods in signal processing. Aim . Being at Amrita changed my life a lot. Molecular biology chiefly concerns itself with understanding the interactions between the various systems of a cell, including the interactions between DNA, RNA and protein biosynthesis as well as learning how these interactions are regulated. Laboratory! [12] suggest a virtual lab for biotechnology students at the Amrita School in India. This lab is for PG students on the various laboratory topics in computer-aided drug design. Educating this will allow users to learn how to use R as an open source language for learning bioinformatics data processing. Combining labs 1, 2 and 3 will give an overall understanding of commonly used computational methods in bioinformatics. support@vlab.co.in; Phone(L) - 011-26582050; Wireless Research Lab Room No - 206/IIA Bharti School of Telecom Indian Institute of Technology Delhi Hauz Khas, New Delhi-110016 The exercises mainly deal with the different algorithms in sequence alignment and provides a computational exploration to the use of various tools used for sequence alignment. Virtual neurophysiology techniques like brain slicing, patch clamping, action potential in neurons, voltage and current clamp protocols have been implemented via user-interactive animations and through use of detailed mathematical simulators. This remote-triggerable online laboratory will teach experiments and offer to introduce biorobotics and neuronal robot techniques. Ecosystems are a complex and delicate balancing game.Ecosystems have an extremely complex web of cause and effect. Amrita Vishwa Vidyapeetham jointly participates with IIT Delhi, IIT Kanpur, IIT Bombay, IIT Madras, IIT Kharagpur, IIT Guwahati, IIT Roorkee, IIIT Hyderabad, and Dayalbagh University. Studies on simple models of interacting species is the main focus this simulation oriented lab. Biotechnology and Biomedical Engineering. Lab II focuses on applied principles of population ecology for PG students. Summer Sprint Integration Workshop at IIT Guwahati. It includes the study of the structure and organization, growth, regulation, movements and interaction of the cells. Genome Annotation and Multiple Sequence Allignment. These experiments and labs will be hosted for open access through the main project website vlab.co.in and at the institution link Amrita Virtual Lab, Bioinformatics is a field which using techniques of informatics to gather, store, analyse and integrate biological data. In the area of physical sciences, a set of simulators for various basic physics labs such as DC circuit simulators, torsion pendulum simulator, tools for demonstrating Faraday's law and Barkhausen effect, virtual optics tools have been built. Get In Touch With Us. Various experiments will deal with the several parameters of Hodgkin-Huxley equations and will model resting and action potentials, voltage and current clamp, pharmacological effects of drugs that block specific channels etc. The addition or removal of one species affects many other species with which it might compete for,or provide food. A population is a collection of individuals of the same species that live together in a region. We'll use the information you provide below to improve our virtual labs. Cell biology is closely related to other areas of biology such as genetics, molecular biology, and biochemistry. In this virtual lab, one will study the computational analysis of proteins. This is a supplementary quiz series for nodal centres.All students are requested to access the quiz using their unique VALUE login ID. The VALUE @ Amrita Virtual Labs Project: Using Web Technology to Provide Virtual Laboratory Access to Students @article{Achuthan2011TheV, title={The VALUE @ Amrita Virtual Labs Project: Using Web Technology to Provide Virtual Laboratory … This virtual lab consist of modelling and simulation experiments for UG/PG students in bioinformatics and computational biology to understand biological processes using a systems biology approach. Bioinformatics Virtual Lab III. In this lab various bio-signals like EEG, EMG, ECG and biomedical equipments like pacemaker, haemodialysis, defibrillator and many more will be demonstrated. Lab II focuses on applied principles of population ecology for PG students.»», The branch of biomedicine concerned with the structure and function of the immune system, innate and acquired immunity, the bodily distinction of self from no self, and laboratory techniques involving the interaction of antigens with specific antibodies.»», The study of microorganisms, which are unicellular or cell-cluster microscopic organisms. Population ecology is the study of populations (especially population abundance) and how they change over time. It consists of simulated laser chacteristics: their interaction with … The branch of biomedicine concerned with the structure and function of the immune system, innate and acquired immunity, the bodily distinction of self from no self, and laboratory techniques involving the interaction of antigens with specific antibodies. … Updates. This lab complements some of the exercises in the Virtual Neurophysiology lab. Virtual Labs at Amrita Vishwa Vidyapeetham Biotechnology and Biomedical Engineering Neurophysiology, Cell biology, Immunology Lab, Microbiology, Molecular Biology, Population Ecology,Biochemistry Virtual Labs. A new set of 35 Virtual Labs … Virtual Labs will be made more effective and realistic by providing additional inputs to the students like accompanying audio and video streaming of an actual lab experiment and equipment. This virtual lab is an introductory course for undergraduate students and deals with the storage and retrieval of data from different biological databases like Gene, Pubmed, GEO, TAIR, Prosite etc.»», This virtual laboratory is for undergraduate and postgraduate students to get a deeper understanding on the analysis of sequence data, its alignment and the evolutionary relationship. These labs focus on helping students retain the real feel of a … Viruses, though not strictly classed as living organisms, are also studied.»», To study the biochemical properties of microorganisms, the various techniques employed in cultivation of fungi and viruses along with the molecular level analysis of microbial genome. Many experiments will help working towards thesis projects.»», This lab will provide an online experience via remote equipment to study biophysics and biophysical techniques.»», Neurophysiology is the study of nervous system function. I was quiet decided on taking Biotechnology for my future studies after my secondary school, but then … The School also coordinates the MHRD effort to design and create virtual laboratories for Biotechnology in collaboration with IIT Mumbai and IIT Delhi at the national level. This lab is a connection of bioinformatics experiments performed using R programming. This includes eukaryotes such as fungi and, protists and prokaryotes. The experiments included in Biochemistry Virtual Lab I are fundamental in nature, dealing with the identification and classification of various carbohydrates, acid-base titrations of amino acids, isolation of proteins from their natural sources, etc.»», Biochemistry Virtual Lab II deals with topics like enzymology, purification of plant pigments and natural products as well as estimation of iodine value and saponification value of fats and oils.»», A population is a collection of individuals of the same species that live together in a region. The study of biology at a molecular level. Studies based on models of predation, competition as seen in interacting species is the main focus this simulation oriented lab. Population ecology is the study of populations (especially population abundance) and how they change over time. This lab is targeted towards PG students with exercises that will allow one to learn visualising proteins in 3D, how to calculate distance among atoms, find active sites in protein … Cell biology is an exciting and dynamic area that helps discover the fascinating world of cells. Studies on simple models of interacting species is the main focus this simulation oriented lab. Stability, Effect of Social Behavior Amongst Predator-Prey Populations, Effects of Carrying Capacity and Satiation in Predator-Prey Dynamics, Optimal Foraging with Minimal Time: A Case of Searching Predators, Optimal Foraging : Searching Predators that Maximize Energy, Optimal Foraging: Sit-and-wait Predators that Maximize Energy, Microparasite and Macroparasite - Host Dynamics, Extraction of IgG Antibodies from Immunized Hen Egg, Isolation of lymphocytes from whole blood, Purification of IgG Antibodies with Ammonium Sulphate, Purification of IgG Antibodies using Affinity Chromatography, Aseptic Technique and the Transfer of Microorganisms, Differential and Cytological Staining Techniques, Bacteriophage Plaque Assay for Phage Titer, Isolation and Identification of Auxotrophic and Drug Resistant Mutants, Isolation and Identification of Two Bacterial Unknowns, Routes of Viral Inoculation in Embryonated Eggs, Preparation of Buffer stocks (TBE,TE and TAE), Maintenance and Storage of DH5alpha E.coli cells, Preparation of Competent Cell (Calcium Chloride Treatment), Extraction of Bacteriophage DNA from Large Scale Cultures Using Proteinase K and SDS, Preparation of stocks of bacteriophage lambda by plate lysis and elution, Cell Organization and Sub Cellular Structure Studies (Prokaryotic and Eukaryotic), Introduction to Biological Image Analysis, Quantification of Lignin in Tissue Sections, Analysis on Molecular Gels: A Case Study in Polyacrylamide Gel Electrophoresis, Quantification of Bacterial Colonies on an Agar Plate, Quantification of Amino Acids Present in a Mixture, Quantification of Protein Present in a Sample, Retrieving structural data of a protein using PDB database, Retrieving Motif Information of a Protein Using Prosite, Retrieving Gene Information from TAIR database, Global alignment of two sequences - Needleman-Wunsch Algorithm, Smith-Waterman Algorithm - Local Alignment of Sequences, Aligning Multiple Sequences with CLUSTAL W, Phylogenetic Analysis using PHYLIP - Rooted trees, Phylogenetic Analysis using PHYLIP - Unrooted trees. Neurophysiology Virtual Lab… It deals with the structures and functions of cellular components such as proteins, carbohydrates, lipids, nucleic acids and other biomolecules. Syllabus Mapping … Virtual Labs at Amrita Vishwa Vidyapeetham Biotechnology and Biomedical Engineering Neurophysiology, Cell biology, Immunology Lab, Microbiology, Molecular Biology, Population … KOLLAM: The Virtual Labs developed by Amrita University Mission are now available free of cost to Indian institutions and students. In this lab, UG/PG students will learn to use image processing techniques to analyze and quantify image data from wet lab experiments such as those in cell biology, biochemistry, molecular biology and immunology laboratories. This lab will provide an online experience via remote equipment to study biophysics and biophysical techniques. By augmenting the virtual labs with a plethora of web-based resources equipped with various learning tools such as videos, animations, demonstrations, quizzes and simulators, these labs have also begun to serve as an online community hub to share and enhance conceptual knowledge. Menu 3 Eaque … Funded by the Union Ministry of Human Resource D Viruses, though not strictly classed as living organisms, are also studied. The addition or removal of one species affects many other species with which it might compete for,or provide food.»», In this lab, UG/PG students will learn to use image processing techniques to analyze and quantify image data from wet lab experiments such as those in cell biology, biochemistry, molecular biology and immunology laboratories.»», This remote-triggerable online laboratory will teach experiments and offer to introduce biorobotics and neuronal robot techniques. Radhamani et al. Amrita Biotech | Amrita School of Biotechnology is one of the premier centre for higher education and research in life sciences in India This lab is targeted towards PG students with exercises that will allow one to learn visualising proteins in 3D, how to calculate distance among atoms, find active sites in protein structures and also delve into some structural analysis methods including docking and homology modeling. “The Sakshat Amrita virtual biotechnology lab project focusing on virtualizing wet-lab techniques and integrating the learning experience has added a new dimension to the regular teaching courses at the … Amrita Virtual Biotechnology laboratory is a new kind of experimental science that is being established as a virtual simulation based laboratory. The exercises mainly deal with the different algorithms in sequence alignment and provides a computational exploration to the use of various tools used for sequence alignment.»», In this virtual lab, one will study the computational analysis of proteins. This project is an initiative of the MHRD under the NME-ICT. To study the biochemical properties of microorganisms, the various techniques employed in cultivation of fungi and viruses along with the molecular level analysis of microbial genome. Cell biology is closely related to other areas of biology such as genetics, molecular biology, and biochemistry.»», Apply Now Visit Us Jobs & Careers Contact Us, Computational Neuroscience and Neurophysiology, Computational Neuroscience and Cognitive Modeling, Modeling fMRI BOLD Correlates of Neural Circuit Activity, Cerebellum Inspired Approach for Pattern Classification in Robots. Crucial to this study are the various interactions between a population and its resources. As a key part of the project, the School of Biotechnology will study and use mathematical techniques in biology to study, hypothesize, and demonstrate complex biological functions. This project is an initiative of the MHRD under the NME-ICT. This virtual laboratory is for undergraduate and postgraduate students to get a deeper understanding on the analysis of sequence data, its alignment and the evolutionary relationship. This lab complements some of the exercises in the Virtual Neurophysiology lab.»», Biochemistry is the study of the chemical processes in living organisms. DOI: 10.1109/GHTC.2011.79 Corpus ID: 12101676. Population ecology is the study of populations (especially population abundance) and how they change over time. Procedure ... Powered by Amrita Virtual Lab … Lab … ‪Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham‬ - ‪Cited by 1,513‬ - ‪Computational Neuroscience‬ - ‪Cerebellum‬ - ‪Neurophysiology‬ - ‪virtual labs‬ - ‪machine learning‬ The focus is on practical skills in using simple electronics to reinforce application of bio-inspired ideas. This lab focuses on using, analysing and processing EEG data and provides a platform for EEG data analysis and visualization, to understand the correlations of neural activity through electroencephalography data. Crucial to this study are the various interactions between a population and its resources. This field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry. Welcome to the Amrita Vishwa Vidyapeetham Virtual Lab online feedback system. In this virtual lab, one will study the computational analysis of proteins. Biochemistry is the study of the chemical processes in living organisms. Estimation of Iodine Value of Fats and Oils, Estimation of blood glucose by Glucose oxidase method, Isolation of β -Amylase from Sweet Potato, Construction of Maltose Standard Curve by DNS Method, Isolation of Plant Pigments by Column Chromatography, Structural Studies of Phycobiliproteins from Spirulina, Construction of Protein Standard Curve using Folin’s Lowry Method, Effect of Substrate Concentration on Enzyme Kinetics, Hydrolysis of Ester using orange peel esterase, Population with Continuous and Discrete Growth, Spread of a Pest Population - Population Invasion, Interspecific Competition and Coexistence, Effect of Interspecific Competition on Species Border, Logistic Population Growth: Continuous and Discrete, Predator - Prey Dynamics - Rats and Snakes (Lotka Volterra Simulation), Effect of Predator Efficiency on Equilibrium Densities & Pop. A paper on Sakshat Amrita Virtual Labs titled, "Complementing Education via Virtual Labs: Implementation and Deployment of Remote Laboratories and Usage Analysis in South Indian Villages", … Biotechnology Admissions 2020 - Amrita Vishwa Vidyapeetham. Amrita lab courses richly rely upon new up-to-date content and various techniques that require a new synergy of knowledge and experimental implementation. This virtual lab is an introductory course for undergraduate students and deals with the storage and retrieval of data from different biological databases like Gene, Pubmed, GEO, TAIR, Prosite etc. The labs can also be made available to students with no access to physical labs … A basic chemistry lab is also being developed as part of the pilot process. Studies based on models of predation, competition as seen in interacting species is the main focus this simulation oriented lab. »», The study of biology at a molecular level. This lab is targeted towards PG students with exercises that will allow one to learn visualising proteins in 3D, how to calculate distance among atoms, find active sites in protein structures and also delve into some structural analysis methods including docking and homology modeling. Reference Books . Thanks for taking the time to share your feedback. Neurophysiology is the study of nervous system function. This field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry. Primarily, it is connected with neurobiology, psychology, neurology, clinical neurophysiology, electrophysiology, biophysical neurophysiology, ethology, neuroanatomy, cognitive science and other brain sciences.»», This lab uses a graphical web-based Neuron simulator and models a section of excitable neuronal membrane using the Hodgkin-Huxley equations. Theory . Amrita Virtual Biotechnology laboratory is a new kind of experimental science that is being established as a virtual simulation based laboratory. Studies based on models of predation, competition as seen in interacting species is the main focus this simulation oriented lab. The Virtual Laboratory is an interactive environment for creating and conducting simulated experiments: a playground for experimentation. A full virtual lab has been developed using the graphical web-based Neuron simulator and models a section ofexcitable neuronal membrane using the Hodgkin-Huxley equations. Bioinformatics and Data Science in Biotechnology, Pairwise sequence alignment of Protein or DNA sequences, Guanine-Cytosine Content Analysis and Basics of DNA Sequence Statistics, Study of Synaptic Transmission (Remote trigger), Measuring Field Potentials Using MEA chips, Understanding the Passive Properties of a Simple Neuron (Remote trigger), Effects of Ion Channels in Membrane Biophysics (Remote trigger), Effect of Noise on Spiking Neurons (Remote trigger), Modeling the delayed rectifier Potassium channels, Modeling the sodium ion channel and its effects on neural signaling, Understanding Frequency-Current relationship, Understanding first spike latency - current relationship, Effects of pharmacological blockers on action potential, Isoelectric Precipitation of Proteins: Casein from Milk, Quantitative Estimation of Amino Acids by Ninhydrin, Separation of Amino Acids by Thin Layer Chromatography. 44 were here. Home » Broad Areas of Virtual Labs Labs ready for use × ... AMRITA VISHWA VIDYAPEETHAM. It includes the study of the structure and organization, growth, regulation, movements and interaction of the cells. These labs focus on helping students retain the real feel of a laboratory, while conducting the experiment from an internet-enabled computer terminal, much in the same way as is done, in a real lab. you are here->home->Biotechnology and Biomedical Engineering->Biomedical and Signal processing Laboratory->To simulate ECG Pulse missing detector.. To simulate ECG Pulse missing detector.. The focus is on practical skills in using simple electronics to reinforce application of bio-inspired ideas. It helps integrate the learning experience among … Specifically, this lab will help analyse biological sequence data using simple R code snippets. Lab I focuses on introduction of principles of population ecology for UG/PG students. The study of microorganisms, which are unicellular or cell-cluster microscopic organisms. Biochemistry Virtual Lab II deals with topics like enzymology, purification of plant pigments and natural products as well as estimation of iodine value and saponification value of fats and oils. As part of the virtual lab project pilot, a virtual neurophysiology lab has been developed in the short period. The cutting-edge curricula along with state-of-the-art facilities of the School will provide a solid foundation in the biological … Various experiments will deal with the several parameters of Hodgkin-Huxley equations and will model resting and action potentials, voltage and current clamp, pharmacological effects of drugs that block specific channels etc. The experiments included in Biochemistry Virtual Lab I are fundamental in nature, dealing with the identification and classification of various carbohydrates, acid-base titrations of amino acids, isolation of proteins from their natural sources, etc. Estimation of Saponification Value of Fats/Oils. This lab uses a graphical web-based Neuron simulator and models a section of excitable neuronal membrane using the Hodgkin-Huxley equations. The Sakshat Amrita virtual biotechnology lab project focusing on virtualizing wet-lab techniques and integrating the learning experience has added a new dimension to the regular teaching courses at the … The Online Labs is based on the idea that lab experiments can be taught using the Internet, more efficiently and less expensively. Combining labs 1, 2 and 3 will give an overall understanding of commonly used computational methods in bioinformatics.»», This virtual lab consist of modelling and simulation experiments for UG/PG students in bioinformatics and computational biology to understand biological processes using a systems biology approach.»», This lab is for PG students on the various laboratory topics in computer-aided drug design.»», Ecosystems are a complex and delicate balancing game.Ecosystems have an extremely complex web of cause and effect. Amrita Virtual lab courses rely upon up-to-date content and various techniques that require a new synergy of knowledge and experimental implementation. Population ecology is the study of populations (especially population abundance) and how they change over time. Lab Integration Kit 1.0.0 Released. Visualizing the Secondary Structure of a Protein, Calculating the Distance between the Ligand and a Particular Amino acid, Finding the Active Site Pockets of a given Protein Molecule, Primary Structure Analysis of a Protein Using ProtParam, Secondary structure analysis of a protein using SOPMA, Surface Analysis of a Protein Using CASTp, Mathematical modeling and simulating of Biochemical network, Import and simulate models from different databases, To Import and simulate a model from the repository, SBML-A markup language for mathematical models in systems biology using cell designer, Creating and Visualizing a Simple Network Model, Analysis of biological networks for feature detection, Integrating Biological Networks and Microarray Expression data, Analyzing the network by finding sub modules, Constructing computational model of a molecule, Predict the structure of protein-Homology Modeling, Absorption and Distribution Property Prediction in Drug Designing Process, Determination of pH of Waste Water Sample, A Brief Introduction to Species Interactions in Ecology, Population Invasion - A Threat to Ecosystem, Study of Foraging of Organisms in the Ecosystem, Bio-inspired Robotics Virtual Labs (Remote Trigger), Controlling a servo motor in a bio-robotic environment (Remote Trigger), Understanding the kinematics of a robotic upper arm (Remote Trigger), Understanding the kinematics of a robotic upper arm - Interactive (Remote Trigger), Light sensing process in a neural circuit (Remote Trigger), Pattern recognition in a hardware neural network (Remote Trigger), Mechanism behind the movement of a Walker robot with 4 neurons (Remote Trigger), Constructing a six core brain like circuit (Remote Trigger), Using a light microscope (Remote Trigger), Observing an animal cell using a light microscope (Remote Trigger), Study of RC Properties of Cell Membrane (Remote Trigger), Study of Electrically excitable cells (Remote trigger), Bursting phenomenon in biology via RC models (Remote Trigger), Multicompartmental modelling of biophysical behaviour of neurons (Remote Trigger), Understanding Photosynthesis as a Biologically Closed Process. Copyright @ 2021 Under the NME ICT initiative of MHRD. It deals with the structures and functions of cellular components such as proteins, carbohydrates, lipids, nucleic acids and other biomolecules. Primarily, it is connected with neurobiology, psychology, neurology, clinical neurophysiology, electrophysiology, biophysical neurophysiology, ethology, neuroanatomy, cognitive science and other brain sciences. Many experiments will help working towards thesis projects. This includes eukaryotes such as fungi and, protists and prokaryotes. 44 were here. This virtual lab is an introductory course for undergraduate students and deals with the storage and retrieval of data from different biological databases like Gene, Pubmed, GEO, TAIR, Prosite etc. Molecular biology chiefly concerns itself with understanding the interactions between the various systems of a cell, including the interactions between DNA, RNA and protein biosynthesis as well as learning how these interactions are regulated.»», Cell biology is an exciting and dynamic area that helps discover the fascinating world of cells. S Diwakar, K Achuthan, P. 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